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Parallel mode not working

Status: Open.

#231 In ncsa/NEAT;

· DeboraMeijer opened on Dec 29, 2025

How is 'ceverage' implemented?

Status: Open.

Bug

#230 In ncsa/NEAT;

· tseemann opened on Dec 14, 2025

Missing conda dependency - bcftools

bugSomething isn't workingSomething isn't working

Status: Open.

#229 In ncsa/NEAT;

· tseemann opened on Dec 14, 2025

OSERRor when moving files from /tmp to /home

Status: Open.

Bug

#228 In ncsa/NEAT;

· tseemann opened on Dec 14, 2025

Missing --version option

enhancementNew feature or requestNew feature or request

Status: Open.

#227 In ncsa/NEAT;

· tseemann opened on Dec 14, 2025

Copy number scripts

Status: Open.

#226 In ncsa/NEAT;

· keshav-gandhi opened on Dec 12, 2025

Improve template config's written descriptions

Status: Open.

#225 In ncsa/NEAT;

· keshav-gandhi opened on Dec 8, 2025

Bacterial Wrapper

Status: Open.

#222 In ncsa/NEAT;

· joshfactorial opened on Dec 3, 2025

Improved bed filtering for multi-threaded

Status: Open.

#220 In ncsa/NEAT;

· joshfactorial opened on Nov 21, 2025

Investigate using the fasta index instead of splitting

Status: Open.

#216 In ncsa/NEAT;

· joshfactorial opened on Nov 14, 2025

Bed filter before splitting

Status: Open.

#215 In ncsa/NEAT;

· joshfactorial opened on Nov 14, 2025

seeded rng not working correctly

Status: Open.

#209 In ncsa/NEAT;

· joshfactorial opened on Nov 11, 2025